BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC000177
Symbol
 Snx27
Product
 Sorting nexin-27-like Protein
NCBI Equivalent
655422
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head14 ± 0.61.76.5 ± 1.10.8
Brain32 ± 0.74.115 ± 2.21.9
Anterior Midgut4.8 ± 0.20.65.5 ± 0.50.7
Posterior Midgut5.1 ± 0.20.64.5 ± 0.20.6
Hindgut6.6 ± 0.90.85.8 ± 1.10.7
Tubules (Free)5.1 ± 0.20.64.3 ± 0.50.5
Perirectal Tubules16 ± 1.02.0  
Rectum13 ± 0.31.6  
Rectal complex11 ± 0.21.38.5 ± 0.71.0
Fat Body8.0 ± 0.91.08.1 ± 1.81.0
Male Gonads7.0 ± 2.00.9  
Female Gonads11 ± 1.31.4  
Carcass5.6 ± 0.50.75.2 ± 0.20.6
Whole Body8.0 ± 0.58.1 ± 0.9
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC000177-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0001776.6 ± 0.52.6 ± 0.11.4 ± 0.21.3 ± 0.2
TC000177-RA6.6 ± 0.52.6 ± 0.11.4 ± 0.21.3 ± 0.2
0–1 h1–24 h24–36 h36–72 h0246810FPKM