BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC000196
Symbol
 LOC661790
Product
 Erythroid differentiation-related factor 1-like Protein
NCBI Equivalent
661790
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head4.4 ± 0.20.92.5 ± 0.30.9
Brain3.4 ± 0.30.73.2 ± 0.31.1
Anterior Midgut3.1 ± 0.20.63.2 ± 0.31.1
Posterior Midgut2.5 ± 0.10.53.5 ± 0.61.2
Hindgut3.9 ± 0.80.83.8 ± 1.01.4
Tubules (Free)5.4 ± 0.91.17.8 ± 0.42.8
Perirectal Tubules3.7 ± 0.50.7  
Rectum4.8 ± 0.41.0  
Rectal complex3.5 ± 0.30.73.5 ± 0.31.3
Fat Body4.0 ± 0.50.82.1 ± 0.80.7
Male Gonads4.8 ± 0.81.0  
Female Gonads7.2 ± 0.81.5  
Carcass4.1 ± 1.50.82.9 ± 0.61.0
Whole Body4.9 ± 0.52.8 ± 0.6
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC000196-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0001969.4 ± 0.84.6 ± 0.92.9 ± 0.22.6 ± 0.3
TC000196-RA9.4 ± 0.84.6 ± 0.92.9 ± 0.22.6 ± 0.3
0–1 h1–24 h24–36 h36–72 h05101520FPKM