BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC000302

Symbol
LOC107399222

Product
Synaptic vesicle glycoprotein 2B-like Protein

NCBI Equivalent
107399222

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.4 ± 0.4	0.4	16 ± 5.2	0.7
Brain	0.3 ± 0.2	0.0	7.4 ± 3.2	0.4
Anterior Midgut	0.1 ± 0.1	0.0	0.1 ± 0.1	0.0
Posterior Midgut	0.0 ± 0.0	0.0	0.3 ± 0.5	0.0
Hindgut	1.5 ± 0.5	0.2	1.9 ± 0.8	0.1
Tubules (Free)	570 ± 36	59	359 ± 56	17
Perirectal Tubules	0.9 ± 1.0	0.1
Rectum	0.4 ± 0.1	0.0
Rectal complex	1.9 ± 0.4	0.2	3.0 ± 0.8	0.1
Fat Body	0.4 ± 0.1	0.0	1.7 ± 0.9	0.1
Male Gonads	1.5 ± 0.6	0.2
Female Gonads	0.1 ± 0.0	0.0
Carcass	2.6 ± 0.7	0.3	2.7 ± 1.4	0.1

Whole Body	9.6 ± 1.6		21 ± 19

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC000302-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC000302	0.0 ± 0.0	0.1 ± 0.0	0.0 ± 0.0	0.1 ± 0.0

TC000302-RA	0.0 ± 0.0	0.1 ± 0.0	0.0 ± 0.0	0.1 ± 0.0