BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC000476

Symbol
Fer1HCH

Product
Ferritin subunit-like Protein

NCBI Equivalent
655420

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	512 ± 25	1.5	331 ± 87	0.5
Brain	732 ± 100	2.1	1105 ± 187	1.7
Anterior Midgut	3941 ± 584	11	7631 ± 1196	12
Posterior Midgut	4024 ± 391	12	5151 ± 422	8.2
Hindgut	2517 ± 1229	7.2	2062 ± 862	3.3
Tubules (Free)	967 ± 99	2.8	894 ± 89	1.4
Perirectal Tubules	1001 ± 230	2.9
Rectum	385 ± 15	1.1
Rectal complex	820 ± 23	2.4	975 ± 161	1.5
Fat Body	2920 ± 637	8.4	9361 ± 4832	15
Male Gonads	1426 ± 974	4.1
Female Gonads	976 ± 226	2.8
Carcass	11316 ± 4965	32	2631 ± 983	4.2

Whole Body	348 ± 34		632 ± 71

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC000476-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC000476	208 ± 26	679 ± 256	1224 ± 592	665 ± 190

TC000476-RA	208 ± 26	679 ± 256	1224 ± 592	665 ± 190