BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC000541

Symbol
LOC663360

Product
IKK gamma

NCBI Equivalent
663360

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	29 ± 1.3	1.0	24 ± 2.7	1.0
Brain	48 ± 3.2	1.6	38 ± 3.7	1.5
Anterior Midgut	49 ± 4.1	1.6	47 ± 4.9	1.9
Posterior Midgut	49 ± 0.7	1.6	53 ± 3.9	2.1
Hindgut	33 ± 5.2	1.1	32 ± 3.5	1.3
Tubules (Free)	47 ± 6.4	1.5	42 ± 1.9	1.7
Perirectal Tubules	47 ± 7.2	1.6
Rectum	31 ± 1.8	1.0
Rectal complex	48 ± 0.5	1.6	39 ± 6.4	1.5
Fat Body	23 ± 7.6	0.8	23 ± 2.7	0.9
Male Gonads	57 ± 2.7	1.9
Female Gonads	19 ± 0.7	0.6
Carcass	38 ± 4.5	1.3	24 ± 1.7	1.0

Whole Body	30 ± 2.7		25 ± 3.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC000541-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC000541	19 ± 0.6	19 ± 0.5	19 ± 2.4	12 ± 2.0

TC000541-RA	19 ± 0.6	19 ± 0.5	19 ± 2.4	12 ± 2.0