BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC000544
NCBI Equivalent
 not available
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head1.9 ± 0.3n.a.2.2 ± 0.31.0
Brain1.1 ± 0.2n.a.1.0 ± 0.30.5
Anterior Midgut0.6 ± 0.2n.a.1.1 ± 0.40.5
Posterior Midgut0.5 ± 0.1n.a.1.2 ± 0.20.6
Hindgut1.3 ± 0.5n.a.1.4 ± 0.60.7
Tubules (Free)1.0 ± 0.1n.a.0.6 ± 0.20.3
Perirectal Tubules4.2 ± 1.42.1  
Rectum1.0 ± 0.1n.a.  
Rectal complex1.8 ± 0.4n.a.1.9 ± 0.30.9
Fat Body0.6 ± 0.2n.a.1.4 ± 1.20.6
Male Gonads0.3 ± 0.1n.a.  
Female Gonads0.1 ± 0.1n.a.  
Carcass1.2 ± 0.6n.a.2.4 ± 1.11.1
Whole Body0.9 ± 0.12.2 ± 0.2
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View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC000544-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0005440.1 ± 0.00.1 ± 0.00.1 ± 0.00.9 ± 0.2
TC000544-RA0.1 ± 0.00.1 ± 0.00.1 ± 0.00.9 ± 0.2
0–1 h1–24 h24–36 h36–72 h0246810FPKM