BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC000711

Symbol
BckdhB

Product
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial-like Protein

iBeetle-Base
TC000711

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	2.8 ± 0.4	0.9	1.8 ± 0.7	0.3
Brain	0.4 ± 0.0	0.1	0.2 ± 0.0	0.0
Anterior Midgut	0.5 ± 0.3	0.2	1.9 ± 0.6	0.3
Posterior Midgut	0.4 ± 0.1	0.1	3.2 ± 0.9	0.5
Hindgut	7.2 ± 2.8	2.4	4.3 ± 0.9	0.6
Tubule	11 ± 1.0	3.7	6.6 ± 0.6	0.9
Perirectal Tubules	1.9 ± 1.3	0.6
Rectal complex	3.1 ± 0.8	1.0	1.6 ± 0.3	0.2
Rectum	6.0 ± 0.8	2.0
Fat Body	14 ± 2.2	4.7	50 ± 4.7	7.1
Male Gonads	2.6 ± 0.3	0.9
Female Gonads	9.5 ± 0.6	3.1
Carcass	16 ± 3.2	5.4	16 ± 12	2.2

Whole Body	3.0 ± 0.3		7.0 ± 2.3

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC000711-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC000711	31 ± 1.8	12 ± 2.2	4.8 ± 0.3	18 ± 2.4

TC000711-RA	31 ± 1.8	12 ± 2.2	4.8 ± 0.3	18 ± 2.4