BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC000813
Symbol
 CCHa1
NCBI Equivalent
103315160
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head7.2 ± 0.23.60.9 ± 0.5n.a.
Brain121 ± 2.96140 ± 1.820
Anterior Midgut0.2 ± 0.1n.a.0.1 ± 0.1n.a.
Posterior Midgut0.0 ± 0.0n.a.0.0 ± 0.0n.a.
Hindgut3.3 ± 4.81.60.3 ± 0.1n.a.
Tubules (Free)0.0 ± 0.0n.a.0.0 ± 0.0n.a.
Perirectal Tubules0.0 ± 0.0n.a.  
Rectum0.0 ± 0.1n.a.  
Rectal complex0.0 ± 0.1n.a.0.0 ± 0.1n.a.
Fat Body3.2 ± 2.51.61.7 ± 2.9n.a.
Male Gonads1.0 ± 0.2n.a.  
Female Gonads0.2 ± 0.2n.a.  
Carcass1.2 ± 1.9n.a.5.0 ± 2.52.5
Whole Body0.7 ± 0.11.3 ± 0.6
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC000813-RA
TC000813-RB
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0008130.2 ± 0.236 ± 4.37.2 ± 0.93.4 ± 0.6
TC000813-RA0.0 ± 0.112 ± 1.62.5 ± 0.81.4 ± 0.7
TC000813-RB0.2 ± 0.223 ± 2.94.7 ± 0.82.0 ± 0.8
0–1 h1–24 h24–36 h36–72 h0510152025303540FPKM