BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC000829

Symbol
LOC100142163

Product
serine protease H18

NCBI Equivalent
100142163

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	54 ± 3.3	7.7	19 ± 18	1.4
Brain	0.6 ± 0.2	0.1	1.5 ± 0.2	0.1
Anterior Midgut	0.7 ± 0.3	0.1	0.9 ± 0.3	0.1
Posterior Midgut	1.0 ± 0.3	0.1	0.7 ± 0.0	0.1
Hindgut	6.3 ± 0.6	0.9	0.2 ± 0.1	0.0
Tubules (Free)	0.0 ± 0.0	0.0	0.2 ± 0.1	0.0
Perirectal Tubules	1.2 ± 1.5	0.2
Rectum	5.1 ± 0.3	0.7
Rectal complex	4.1 ± 1.3	0.6	3.8 ± 1.0	0.3
Fat Body	3.1 ± 0.8	0.4	0.3 ± 0.3	0.0
Male Gonads	1.3 ± 0.8	0.2
Female Gonads	0.3 ± 0.3	0.0
Carcass	56 ± 21	7.9	47 ± 28	3.5

Whole Body	7.1 ± 1.1		13 ± 1.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC000829-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC000829	0.0 ± 0.0	1.6 ± 0.1	3.2 ± 0.6	4.5 ± 0.9

TC000829-RA	0.0 ± 0.0	1.6 ± 0.1	3.2 ± 0.6	4.5 ± 0.9