BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC000872
Symbol
 Upf3
NCBI Equivalent
663859
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head8.6 ± 0.40.97.7 ± 0.31.0
Brain23 ± 2.42.418 ± 2.12.2
Anterior Midgut17 ± 1.61.814 ± 3.51.8
Posterior Midgut17 ± 1.41.814 ± 0.81.8
Hindgut10 ± 0.81.18.8 ± 0.41.1
Tubules (Free)11 ± 0.81.19.8 ± 0.31.3
Perirectal Tubules18 ± 4.11.9  
Rectum6.4 ± 0.50.7  
Rectal complex16 ± 0.51.712 ± 1.61.6
Fat Body11 ± 1.31.17.7 ± 2.51.0
Male Gonads15 ± 0.71.6  
Female Gonads13 ± 1.21.3  
Carcass7.6 ± 1.00.87.8 ± 0.91.0
Whole Body9.6 ± 1.07.8 ± 0.9
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC000872-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC00087230 ± 2.530 ± 3.628 ± 3.420 ± 2.6
TC000872-RA30 ± 2.530 ± 3.628 ± 3.420 ± 2.6
0–1 h1–24 h24–36 h36–72 h0510152025303540FPKM