BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC000997
Symbol
 Herc4
Product
 Probable E3 ubiquitin-protein ligase HERC4-like Protein
NCBI Equivalent
660213
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head7.7 ± 0.40.46.0 ± 1.30.8
Brain4.6 ± 0.20.34.9 ± 0.40.6
Anterior Midgut6.5 ± 0.60.48.1 ± 0.41.0
Posterior Midgut5.4 ± 1.40.36.9 ± 0.90.9
Hindgut8.6 ± 1.20.542 ± 125.5
Tubules (Free)13 ± 0.50.818 ± 1.42.3
Perirectal Tubules6.6 ± 0.20.4  
Rectum8.4 ± 0.80.5  
Rectal complex7.7 ± 1.10.48.1 ± 0.61.1
Fat Body12 ± 2.70.74.2 ± 1.70.5
Male Gonads19 ± 4.51.1  
Female Gonads6.0 ± 0.30.3  
Carcass5.5 ± 0.60.34.8 ± 2.20.6
Whole Body17 ± 1.87.7 ± 1.8
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC000997-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0009973.2 ± 0.41.7 ± 0.21.9 ± 0.31.6 ± 0.2
TC000997-RA3.2 ± 0.41.7 ± 0.21.9 ± 0.31.6 ± 0.2
0–1 h1–24 h24–36 h36–72 h0246810FPKM