BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC001108

Symbol
Dcr-2

Product
Endoribonuclease Dicer-like Protein

NCBI Equivalent
658023

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	9.5 ± 0.3	0.7	4.4 ± 1.6	0.3
Brain	2.5 ± 0.2	0.2	2.3 ± 0.3	0.2
Anterior Midgut	19 ± 6.3	1.4	7.6 ± 0.7	0.6
Posterior Midgut	21 ± 4.3	1.5	7.4 ± 1.3	0.6
Hindgut	2.6 ± 0.5	0.2	3.7 ± 0.8	0.3
Tubules (Free)	13 ± 2.6	1.0	16 ± 1.0	1.3
Perirectal Tubules	6.8 ± 0.5	0.5
Rectum	10 ± 0.3	0.7
Rectal complex	5.6 ± 0.9	0.4	6.6 ± 0.2	0.5
Fat Body	3.4 ± 0.3	0.2	3.2 ± 0.6	0.2
Male Gonads	3.6 ± 0.8	0.3
Female Gonads	1.5 ± 0.2	0.1
Carcass	3.3 ± 0.2	0.2	2.6 ± 0.8	0.2

Whole Body	14 ± 1.1		13 ± 7.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC001108-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC001108	1.2 ± 0.0	1.0 ± 0.0	1.2 ± 0.1	1.3 ± 0.6

TC001108-RA	1.2 ± 0.0	1.0 ± 0.0	1.2 ± 0.1	1.3 ± 0.6