BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC001197

Symbol
Vang

Product
van-gogh

NCBI Equivalent
664055

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.1 ± 0.3	0.9	7.0 ± 1.0	1.9
Brain	7.4 ± 0.2	2.1	8.4 ± 0.8	2.3
Anterior Midgut	2.4 ± 0.2	0.7	3.0 ± 0.5	0.8
Posterior Midgut	2.2 ± 0.3	0.6	3.6 ± 0.7	1.0
Hindgut	3.1 ± 0.3	0.9	3.7 ± 0.2	1.0
Tubules (Free)	2.1 ± 0.3	0.6	2.7 ± 0.1	0.7
Perirectal Tubules	2.5 ± 0.7	0.7
Rectum	3.7 ± 0.2	1.1
Rectal complex	2.2 ± 0.1	0.6	4.1 ± 1.2	1.1
Fat Body	2.5 ± 0.3	0.7	1.5 ± 0.5	0.4
Male Gonads	2.4 ± 0.6	0.7
Female Gonads	8.0 ± 1.0	2.3
Carcass	2.0 ± 0.3	0.6	2.9 ± 1.0	0.8

Whole Body	3.4 ± 0.4		3.7 ± 0.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC001197-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC001197	5.4 ± 0.8	4.1 ± 1.1	4.8 ± 1.6	5.5 ± 1.5

TC001197-RA	5.4 ± 0.8	4.1 ± 1.1	4.8 ± 1.6	5.5 ± 1.5