BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC001237
Symbol
 HPS1
Product
 Hermansky-Pudlak syndrome 1 protein homolog-like Protein
NCBI Equivalent
659300
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head8.6 ± 0.41.06.5 ± 0.81.2
Brain21 ± 1.12.515 ± 0.12.7
Anterior Midgut4.4 ± 0.40.55.7 ± 0.81.0
Posterior Midgut3.7 ± 0.60.46.0 ± 0.81.1
Hindgut5.8 ± 1.30.77.0 ± 1.41.3
Tubules (Free)8.5 ± 0.31.09.6 ± 0.41.7
Perirectal Tubules6.0 ± 0.30.7  
Rectum4.6 ± 0.50.5  
Rectal complex8.1 ± 0.30.97.0 ± 1.01.3
Fat Body7.8 ± 1.00.93.4 ± 1.00.6
Male Gonads11 ± 1.51.2  
Female Gonads6.0 ± 0.30.7  
Carcass3.9 ± 1.70.54.3 ± 1.00.8
Whole Body8.6 ± 1.45.5 ± 1.9
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC001237-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0012375.2 ± 0.22.3 ± 0.51.6 ± 0.22.5 ± 0.3
TC001237-RA5.2 ± 0.22.3 ± 0.51.6 ± 0.22.5 ± 0.3
0–1 h1–24 h24–36 h36–72 h0246810FPKM