BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC001252

Symbol
LOC660922

NCBI Equivalent
660922

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	9.2 ± 1.1	3.6	19 ± 3.2	3.8
Brain	15 ± 0.3	6.0	7.5 ± 1.0	1.5
Anterior Midgut	0.9 ± 0.2	0.3	3.2 ± 0.5	0.7
Posterior Midgut	1.0 ± 0.3	0.4	2.0 ± 0.4	0.4
Hindgut	2.8 ± 0.3	1.1	4.6 ± 0.6	0.9
Tubules (Free)	0.7 ± 0.1	0.3	0.5 ± 0.0	0.1
Perirectal Tubules	2.6 ± 1.1	1.0
Rectum	3.5 ± 0.2	1.4
Rectal complex	4.8 ± 0.6	1.9	2.6 ± 0.2	0.5
Fat Body	0.7 ± 0.1	0.3	0.2 ± 0.1	0.0
Male Gonads	0.5 ± 0.2	0.2
Female Gonads	0.3 ± 0.1	0.1
Carcass	8.3 ± 1.6	3.2	12 ± 1.8	2.4

Whole Body	2.5 ± 0.2		4.9 ± 1.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC001252-RA
TC001252-RB
TC001252-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC001252	0.4 ± 0.0	0.3 ± 0.1	0.3 ± 0.1	1.5 ± 0.4

TC001252-RA	0.2 ± 0.1	0.1 ± 0.1	0.1 ± 0.1	0.0 ± 0.0
TC001252-RB	0.1 ± 0.1	0.1 ± 0.0	0.1 ± 0.1	0.4 ± 0.1
TC001252-RC	0.1 ± 0.0	0.1 ± 0.1	0.0 ± 0.0	1.1 ± 0.3