BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC001317
Symbol
 RpS16
Product
 40S ribosomal protein S16-like Protein
NCBI Equivalent
659371
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head183 ± 7.41.0592 ± 1331.6
Brain29 ± 5.50.292 ± 280.2
Anterior Midgut1534 ± 898.0533 ± 561.4
Posterior Midgut1702 ± 2608.9611 ± 211.6
Hindgut171 ± 510.9160 ± 350.4
Tubules (Free)349 ± 231.8291 ± 5.60.8
Perirectal Tubules154 ± 200.8  
Rectum217 ± 141.1  
Rectal complex242 ± 301.3275 ± 140.7
Fat Body152 ± 190.8416 ± 2951.1
Male Gonads195 ± 921.0  
Female Gonads272 ± 261.4  
Carcass225 ± 631.2474 ± 1601.3
Whole Body191 ± 17376 ± 98
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC001317-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC001317249 ± 48976 ± 2181012 ± 344490 ± 94
TC001317-RA249 ± 48976 ± 2181012 ± 344490 ± 94
0–1 h1–24 h24–36 h36–72 h0500100015002000FPKM