BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC001320

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.5 ± 0.2	0.8	4.7 ± 0.9	0.9
Brain	0.3 ± 0.1	0.1	4.3 ± 2.4	0.8
Anterior Midgut	26 ± 1.2	5.8	22 ± 1.6	4.3
Posterior Midgut	23 ± 2.1	5.1	16 ± 1.4	3.1
Hindgut	4.5 ± 1.1	1.0	1.1 ± 0.2	0.2
Tubules (Free)	0.8 ± 0.3	0.2	1.2 ± 0.6	0.2
Perirectal Tubules	2.3 ± 0.1	0.5
Rectum	1.9 ± 0.4	0.4
Rectal complex	2.4 ± 0.4	0.5	2.4 ± 0.3	0.5
Fat Body	1.9 ± 1.1	0.4	0.8 ± 0.0	0.2
Male Gonads	4.8 ± 0.4	1.1
Female Gonads	6.5 ± 0.5	1.5
Carcass	4.9 ± 1.1	1.1	2.5 ± 0.7	0.5

Whole Body	4.4 ± 0.3		5.0 ± 1.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC001320-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC001320	1.3 ± 0.1	4.3 ± 0.6	5.0 ± 0.8	4.3 ± 0.9

TC001320-RA	1.3 ± 0.1	4.3 ± 0.6	5.0 ± 0.8	4.3 ± 0.9