BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC001323

Symbol
Ctl2

Product
CTL-like protein 2

NCBI Equivalent
659907

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	16 ± 1.7	0.6	8.2 ± 0.9	0.2
Brain	12 ± 0.6	0.5	9.6 ± 2.3	0.3
Anterior Midgut	548 ± 110	22	281 ± 57	8.0
Posterior Midgut	454 ± 81	18	239 ± 42	6.8
Hindgut	26 ± 11	1.1	26 ± 1.8	0.7
Tubules (Free)	38 ± 8.6	1.5	49 ± 4.3	1.4
Perirectal Tubules	20 ± 2.0	0.8
Rectum	24 ± 2.4	1.0
Rectal complex	24 ± 1.3	0.9	19 ± 0.9	0.5
Fat Body	26 ± 9.1	1.0	12 ± 8.9	0.3
Male Gonads	11 ± 1.3	0.5
Female Gonads	43 ± 25	1.7
Carcass	7.4 ± 1.1	0.3	6.6 ± 4.0	0.2

Whole Body	25 ± 2.5		35 ± 15

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC001323-RA
TC001323-RB
TC001323-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC001323	5.2 ± 0.2	3.8 ± 0.1	1.2 ± 0.2	1.6 ± 0.2

TC001323-RA	1.7 ± 0.1	0.8 ± 0.2	0.2 ± 0.1	0.3 ± 0.1
TC001323-RB	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0
TC001323-RC	3.5 ± 0.2	3.0 ± 0.2	1.0 ± 0.2	1.2 ± 0.2