BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC001382
Symbol
 bif
Product
 bifocal
NCBI Equivalent
103312186
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head7.1 ± 0.60.612 ± 3.31.1
Brain18 ± 0.41.612 ± 0.21.1
Anterior Midgut18 ± 3.01.724 ± 3.12.2
Posterior Midgut22 ± 3.62.034 ± 2.13.0
Hindgut5.0 ± 0.50.55.2 ± 0.00.5
Tubules (Free)7.7 ± 0.90.77.5 ± 0.70.7
Perirectal Tubules7.0 ± 1.10.6  
Rectum6.2 ± 0.80.6  
Rectal complex4.7 ± 0.50.46.9 ± 1.40.6
Fat Body8.2 ± 1.60.86.4 ± 1.70.6
Male Gonads7.9 ± 0.90.7  
Female Gonads52 ± 8.74.8  
Carcass3.9 ± 0.40.48.0 ± 0.60.7
Whole Body11 ± 2.511 ± 2.2
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC001382-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC00138295 ± 2247 ± 3.723 ± 4.023 ± 1.1
TC001382-RA95 ± 2247 ± 3.723 ± 4.023 ± 1.1
0–1 h1–24 h24–36 h36–72 h050100150200FPKM