BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC001384
Symbol
 Vps16A
Product
 Vacuolar protein sorting-associated protein 16 homolog-like Protein
NCBI Equivalent
659831
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head8.4 ± 0.11.47.4 ± 0.70.8
Brain12 ± 0.62.09.6 ± 0.51.1
Anterior Midgut11 ± 0.31.812 ± 0.71.3
Posterior Midgut9.8 ± 1.21.611 ± 1.31.2
Hindgut7.4 ± 0.81.212 ± 0.41.3
Tubules (Free)11 ± 0.71.913 ± 0.21.4
Perirectal Tubules10 ± 0.51.7  
Rectum9.3 ± 0.31.6  
Rectal complex10.0 ± 0.41.710 ± 0.51.1
Fat Body6.4 ± 0.91.18.2 ± 2.10.9
Male Gonads7.4 ± 2.01.3  
Female Gonads5.7 ± 0.21.0  
Carcass6.2 ± 0.21.06.6 ± 2.10.7
Whole Body5.9 ± 0.38.9 ± 0.7
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC001384-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0013842.6 ± 0.31.6 ± 0.11.3 ± 0.21.5 ± 0.3
TC001384-RA2.6 ± 0.31.6 ± 0.11.3 ± 0.21.5 ± 0.3
0–1 h1–24 h24–36 h36–72 h0246810FPKM