BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC001392
Symbol
 Sce
Product
 E3 ubiquitin-protein ligase RING1-like Protein
NCBI Equivalent
659139
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head5.7 ± 1.30.716 ± 1.52.0
Brain17 ± 1.02.117 ± 2.12.2
Anterior Midgut20 ± 2.52.522 ± 2.52.8
Posterior Midgut20 ± 3.82.520 ± 1.92.6
Hindgut11 ± 0.21.316 ± 0.82.0
Tubules (Free)5.4 ± 0.40.75.8 ± 0.30.7
Perirectal Tubules9.4 ± 0.91.2  
Rectum11 ± 0.81.3  
Rectal complex11 ± 0.91.38.4 ± 2.01.1
Fat Body15 ± 3.01.911 ± 0.61.4
Male Gonads25 ± 5.43.1  
Female Gonads27 ± 3.33.3  
Carcass23 ± 1.12.918 ± 1.42.3
Whole Body8.1 ± 0.37.8 ± 2.2
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC001392-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC00139253 ± 3.859 ± 6.566 ± 9.353 ± 4.8
TC001392-RA53 ± 3.859 ± 6.566 ± 9.353 ± 4.8
0–1 h1–24 h24–36 h36–72 h01020304050607080FPKM