BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC001575

Symbol
LOC100141695

NCBI Equivalent
100141695

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	18 ± 0.6	3.2	5.3 ± 1.2	1.0
Brain	146 ± 13	26	69 ± 6.3	14
Anterior Midgut	3.2 ± 0.2	0.6	3.5 ± 0.3	0.7
Posterior Midgut	3.3 ± 0.2	0.6	4.3 ± 1.2	0.9
Hindgut	10 ± 6.8	1.8	6.0 ± 0.9	1.2
Tubules (Free)	5.0 ± 0.1	0.9	4.3 ± 0.1	0.9
Perirectal Tubules	13 ± 0.2	2.2
Rectum	14 ± 1.3	2.5
Rectal complex	13 ± 1.2	2.4	9.4 ± 0.8	1.9
Fat Body	5.7 ± 0.8	1.0	4.8 ± 1.8	0.9
Male Gonads	5.3 ± 2.3	0.9
Female Gonads	11 ± 1.9	1.9
Carcass	6.1 ± 2.2	1.1	5.7 ± 1.2	1.1

Whole Body	5.6 ± 0.3		5.0 ± 0.7

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC001575-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC001575	2.4 ± 0.2	0.9 ± 0.1	1.2 ± 0.1	2.2 ± 0.2

TC001575-RA	2.4 ± 0.2	0.9 ± 0.1	1.2 ± 0.1	2.2 ± 0.2