BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC001737

NCBI Equivalent
not available

Fly Homologues
none identified

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	5.5 ± 0.5	2.4	0.8 ± 0.4	0.3
Brain	1.3 ± 0.2	0.6	1.0 ± 0.1	0.4
Anterior Midgut	0.4 ± 0.1	0.2	0.4 ± 0.1	0.2
Posterior Midgut	0.4 ± 0.1	0.2	0.4 ± 0.1	0.2
Hindgut	0.6 ± 0.3	0.3	1.1 ± 0.6	0.4
Tubules (Free)	4.6 ± 0.4	2.0	5.0 ± 0.1	2.1
Perirectal Tubules	5.0 ± 1.6	2.1
Rectum	4.4 ± 0.5	1.9
Rectal complex	1.8 ± 0.7	0.8	1.3 ± 0.1	0.5
Fat Body	0.5 ± 0.2	0.2	0.7 ± 0.3	0.3
Male Gonads	0.1 ± 0.1	0.1
Female Gonads	0.3 ± 0.1	0.1
Carcass	0.8 ± 0.4	0.3	0.8 ± 0.2	0.3

Whole Body	2.3 ± 0.2		2.4 ± 2.1

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC001737-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC001737	0.6 ± 0.0	0.5 ± 0.2	0.5 ± 0.2	0.6 ± 0.1

TC001737-RA	0.6 ± 0.0	0.5 ± 0.2	0.5 ± 0.2	0.6 ± 0.1