BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC001752

Symbol
LOC656818

Product
Solute carrier family 12 member 8-like Protein

NCBI Equivalent
656818

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	14 ± 0.6	0.9	29 ± 6.7	0.9
Brain	19 ± 0.5	1.3	17 ± 1.5	0.5
Anterior Midgut	81 ± 10	5.4	161 ± 7.1	4.9
Posterior Midgut	110 ± 5.9	7.3	237 ± 46	7.2
Hindgut	25 ± 5.6	1.6	37 ± 7.6	1.1
Tubules (Free)	30 ± 2.1	2.0	41 ± 3.0	1.2
Perirectal Tubules	31 ± 6.6	2.0
Rectum	27 ± 2.9	1.8
Rectal complex	24 ± 0.3	1.6	35 ± 3.7	1.1
Fat Body	11 ± 2.8	0.7	14 ± 4.9	0.4
Male Gonads	6.5 ± 1.7	0.4
Female Gonads	8.0 ± 0.7	0.5
Carcass	12 ± 0.7	0.8	17 ± 3.2	0.5

Whole Body	15 ± 1.0		33 ± 8.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC001752-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC001752	2.4 ± 0.3	3.2 ± 0.3	3.6 ± 0.8	5.4 ± 1.0

TC001752-RA	2.4 ± 0.3	3.2 ± 0.3	3.6 ± 0.8	5.4 ± 1.0