BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC001772

Symbol
LOC100141800

Product
Pleckstrin homology domain-containing family J member 1-like Protein

NCBI Equivalent
100141800

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	14 ± 0.8	2.2	17 ± 0.9	1.8
Brain	22 ± 0.1	3.5	30 ± 3.2	3.2
Anterior Midgut	7.6 ± 1.0	1.2	11 ± 2.8	1.2
Posterior Midgut	8.4 ± 1.2	1.4	9.7 ± 1.9	1.0
Hindgut	14 ± 1.9	2.3	9.9 ± 1.1	1.0
Tubules (Free)	5.5 ± 1.1	0.9	4.2 ± 0.5	0.4
Perirectal Tubules	21 ± 1.7	3.4
Rectum	15 ± 0.5	2.4
Rectal complex	16 ± 0.8	2.6	13 ± 1.3	1.3
Fat Body	5.4 ± 0.8	0.9	11 ± 2.3	1.1
Male Gonads	5.0 ± 0.2	0.8
Female Gonads	14 ± 2.0	2.3
Carcass	27 ± 2.4	4.3	27 ± 2.5	2.9

Whole Body	6.2 ± 0.4		9.5 ± 3.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC001772-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC001772	82 ± 10.0	44 ± 2.7	53 ± 6.9	55 ± 11

TC001772-RA	82 ± 10.0	44 ± 2.7	53 ± 6.9	55 ± 11