BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC001885
Symbol
 LOC658006
Product
 twine
NCBI Equivalent
658006
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head3.7 ± 0.40.85.3 ± 0.61.7
Brain2.7 ± 0.30.67.3 ± 1.22.3
Anterior Midgut15 ± 1.13.310 ± 0.23.3
Posterior Midgut13 ± 0.92.88.7 ± 0.92.7
Hindgut2.9 ± 1.10.62.5 ± 0.30.8
Tubules (Free)0.3 ± 0.10.12.2 ± 0.50.7
Perirectal Tubules5.3 ± 1.21.2  
Rectum2.1 ± 0.50.5  
Rectal complex2.1 ± 0.40.53.2 ± 0.91.0
Fat Body20 ± 4.24.55.0 ± 0.81.6
Male Gonads1.7 ± 0.10.4  
Female Gonads157 ± 5135  
Carcass3.9 ± 0.90.94.3 ± 0.21.3
Whole Body4.5 ± 1.73.2 ± 1.4
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC001885-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC00188551 ± 5.232 ± 6.442 ± 2.046 ± 3.3
TC001885-RA51 ± 5.232 ± 6.442 ± 2.046 ± 3.3
0–1 h1–24 h24–36 h36–72 h0102030405060FPKM