BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC002389

Symbol
LOC655932

Product
Proton-coupled amino acid transporter 4-like Protein

NCBI Equivalent
655932

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	34 ± 2.6	1.4	1.3 ± 0.9	0.0
Brain	0.7 ± 0.2	0.0	0.2 ± 0.1	0.0
Anterior Midgut	1.9 ± 1.6	0.1	0.5 ± 0.2	0.0
Posterior Midgut	0.4 ± 0.3	0.0	1.3 ± 0.6	0.0
Hindgut	28 ± 9.8	1.2	38 ± 20	1.1
Tubules (Free)	0.4 ± 0.3	0.0	10 ± 0.9	0.3
Perirectal Tubules	4.4 ± 1.3	0.2
Rectum	3.4 ± 0.9	0.1
Rectal complex	1.7 ± 0.3	0.1	0.9 ± 0.1	0.0
Fat Body	59 ± 31	2.5	130 ± 67	3.6
Male Gonads	3.8 ± 1.2	0.2
Female Gonads	1.6 ± 0.2	0.1
Carcass	235 ± 90	10	17 ± 15	0.5

Whole Body	23 ± 5.1		36 ± 24

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC002389-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC002389	0.0 ± 0.0	1.6 ± 0.2	0.3 ± 0.1	0.1 ± 0.0

TC002389-RA	0.0 ± 0.0	1.6 ± 0.2	0.3 ± 0.1	0.1 ± 0.0