BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC002427

Symbol
LOC103312501

NCBI Equivalent
103312501

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.4 ± 0.3	0.7	2.8 ± 0.5	0.8
Brain	1.8 ± 0.4	0.4	2.1 ± 0.0	0.6
Anterior Midgut	5.0 ± 0.4	1.0	4.2 ± 0.2	1.1
Posterior Midgut	6.1 ± 1.9	1.3	3.8 ± 0.1	1.0
Hindgut	4.5 ± 0.4	0.9	3.3 ± 0.6	0.9
Tubules (Free)	3.9 ± 0.2	0.8	4.0 ± 0.1	1.1
Perirectal Tubules	1.7 ± 0.1	0.4
Rectum	2.4 ± 0.3	0.5
Rectal complex	3.8 ± 0.3	0.8	4.0 ± 0.2	1.1
Fat Body	4.2 ± 0.7	0.9	25 ± 7.6	6.6
Male Gonads	5.4 ± 0.5	1.1
Female Gonads	4.4 ± 0.8	0.9
Carcass	7.9 ± 0.5	1.6	11 ± 3.0	2.8

Whole Body	4.8 ± 0.2		3.8 ± 0.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC002427-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC002427	5.2 ± 0.4	3.8 ± 0.1	2.5 ± 0.3	1.8 ± 0.3

TC002427-RA	5.2 ± 0.4	3.8 ± 0.1	2.5 ± 0.3	1.8 ± 0.3