BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC002495

Symbol
fidipidine

Product
Coiled-coil domain-containing protein 93-like Protein

NCBI Equivalent
655268

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	6.2 ± 0.8	0.4	4.2 ± 0.4	1.0
Brain	16 ± 1.5	1.1	7.7 ± 0.3	1.8
Anterior Midgut	4.2 ± 0.4	0.3	4.2 ± 0.6	1.0
Posterior Midgut	4.0 ± 0.4	0.3	5.0 ± 0.5	1.2
Hindgut	5.0 ± 0.7	0.3	4.4 ± 0.4	1.0
Tubules (Free)	5.7 ± 0.6	0.4	4.7 ± 0.2	1.1
Perirectal Tubules	3.9 ± 0.2	0.3
Rectum	4.1 ± 0.4	0.3
Rectal complex	4.3 ± 1.1	0.3	4.0 ± 0.2	1.0
Fat Body	15 ± 2.1	1.0	8.3 ± 1.9	2.0
Male Gonads	37 ± 7.2	2.5
Female Gonads	5.8 ± 1.2	0.4
Carcass	4.6 ± 0.7	0.3	4.2 ± 1.0	1.0

Whole Body	15 ± 2.1		4.2 ± 0.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC002495-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC002495	3.2 ± 0.2	3.2 ± 0.4	2.9 ± 0.3	2.3 ± 0.3

TC002495-RA	3.2 ± 0.2	3.2 ± 0.4	2.9 ± 0.3	2.3 ± 0.3