BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC002540
Symbol
 HDAC1
Product
 Histone deacetylase Rpd3-like Protein
NCBI Equivalent
655044
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head8.9 ± 0.40.914 ± 0.91.3
Brain30 ± 0.43.031 ± 3.52.8
Anterior Midgut36 ± 1.43.529 ± 1.82.6
Posterior Midgut35 ± 2.23.427 ± 1.92.5
Hindgut17 ± 0.81.614 ± 2.31.3
Tubules (Free)8.6 ± 0.60.811 ± 0.71.0
Perirectal Tubules15 ± 1.61.5  
Rectum17 ± 0.81.6  
Rectal complex12 ± 1.41.214 ± 0.91.2
Fat Body13 ± 0.91.311 ± 2.21.0
Male Gonads18 ± 2.11.7  
Female Gonads44 ± 9.74.3  
Carcass9.1 ± 0.60.912 ± 2.11.1
Whole Body10 ± 0.311 ± 1.1
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC002540-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC00254017 ± 2.023 ± 2.233 ± 3.218 ± 1.4
TC002540-RA17 ± 2.023 ± 2.233 ± 3.218 ± 1.4
0–1 h1–24 h24–36 h36–72 h0510152025303540FPKM