BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC002597

NCBI Equivalent
not available

Fly Homologues
none identified

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	0.3 ± 0.4	0.0	2.2 ± 0.9	0.0
Brain	0.0 ± 0.0	0.0	0.2 ± 0.2	0.0
Anterior Midgut	0.6 ± 0.5	0.0	1.0 ± 0.9	0.0
Posterior Midgut	37 ± 19	0.2	69 ± 37	0.1
Hindgut	39 ± 46	0.2	17 ± 14	0.0
Tubules (Free)	21080 ± 1525	94	13524 ± 1614	17
Perirectal Tubules	4.0 ± 2.4	0.0
Rectum	0.8 ± 0.7	0.0
Rectal complex	13 ± 1.6	0.1	22 ± 7.8	0.0
Fat Body	2.4 ± 0.6	0.0	92 ± 42	0.1
Male Gonads	6.7 ± 7.0	0.0
Female Gonads	0.4 ± 0.1	0.0
Carcass	20 ± 35	0.1	11 ± 7.0	0.0

Whole Body	225 ± 31		797 ± 693

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC002597-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC002597	0.2 ± 0.1	0.2 ± 0.1	0.2 ± 0.1	0.1 ± 0.1

TC002597-RA	0.2 ± 0.1	0.2 ± 0.1	0.2 ± 0.1	0.1 ± 0.1