BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC002665

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	4.2 ± 1.0	1.5	15 ± 2.2	2.4
Brain	0.8 ± 0.1	0.3	0.7 ± 0.1	0.1
Anterior Midgut	2.6 ± 0.8	0.9	2.1 ± 0.2	0.3
Posterior Midgut	3.1 ± 0.5	1.1	3.3 ± 0.2	0.5
Hindgut	1.2 ± 0.2	0.4	4.9 ± 1.5	0.8
Tubules (Free)	4.5 ± 0.3	1.7	2.6 ± 0.3	0.4
Perirectal Tubules	2.7 ± 0.8	1.0
Rectum	5.7 ± 0.3	2.1
Rectal complex	3.9 ± 0.6	1.4	5.8 ± 1.4	1.0
Fat Body	1.9 ± 0.3	0.7	1.1 ± 0.1	0.2
Male Gonads	0.3 ± 0.0	0.1
Female Gonads	0.5 ± 0.2	0.2
Carcass	2.5 ± 0.6	0.9	2.2 ± 0.8	0.4

Whole Body	2.7 ± 0.4		6.1 ± 1.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC002665-RA
TC002665-RB
TC002665-RC
TC002665-RD
TC002665-RE

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC002665	1.1 ± 0.1	1.7 ± 0.3	1.6 ± 0.2	2.2 ± 0.3

TC002665-RA	0.2 ± 0.1	0.0 ± 0.0	0.1 ± 0.1	0.1 ± 0.1
TC002665-RB	0.0 ± 0.0	0.1 ± 0.1	0.1 ± 0.1	0.2 ± 0.1
TC002665-RC	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0
TC002665-RD	0.8 ± 0.1	1.5 ± 0.3	1.4 ± 0.1	1.9 ± 0.3
TC002665-RE	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.1