BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC002864

Symbol
Vap33

Product
Vesicle-associated membrane protein-associated protein B-like Protein

NCBI Equivalent
656484

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	40 ± 0.4	0.9	40 ± 5.1	1.5
Brain	183 ± 5.1	4.1	106 ± 4.3	3.8
Anterior Midgut	91 ± 14	2.0	99 ± 30	3.6
Posterior Midgut	81 ± 3.0	1.8	76 ± 16	2.8
Hindgut	121 ± 59	2.7	108 ± 62	3.9
Tubules (Free)	41 ± 3.8	0.9	46 ± 1.9	1.7
Perirectal Tubules	72 ± 9.2	1.6
Rectum	56 ± 2.3	1.2
Rectal complex	38 ± 3.6	0.8	43 ± 3.1	1.5
Fat Body	99 ± 28	2.2	48 ± 15	1.7
Male Gonads	228 ± 17	5.1
Female Gonads	75 ± 8.4	1.7
Carcass	94 ± 30	2.1	85 ± 17	3.1

Whole Body	45 ± 6.5		28 ± 2.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC002864-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC002864	19 ± 0.5	18 ± 1.1	18 ± 1.6	19 ± 2.3

TC002864-RA	19 ± 0.5	18 ± 1.1	18 ± 1.6	19 ± 2.3