BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC002911

Symbol
cue

Product
Protein cueball-like Protein

NCBI Equivalent
664197

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	6.8 ± 0.6	0.6	4.5 ± 1.0	0.8
Brain	7.5 ± 0.5	0.7	3.8 ± 0.7	0.6
Anterior Midgut	5.9 ± 0.3	0.5	3.8 ± 1.1	0.6
Posterior Midgut	7.8 ± 1.0	0.7	4.3 ± 0.5	0.7
Hindgut	29 ± 8.9	2.6	15 ± 5.6	2.6
Tubules (Free)	6.9 ± 2.1	0.6	3.7 ± 0.7	0.6
Perirectal Tubules	22 ± 3.0	2.0
Rectum	22 ± 1.6	1.9
Rectal complex	11 ± 2.0	1.0	11 ± 1.9	1.9
Fat Body	6.1 ± 0.1	0.6	11 ± 0.9	1.9
Male Gonads	7.0 ± 0.6	0.6
Female Gonads	8.3 ± 1.7	0.7
Carcass	7.8 ± 2.9	0.7	9.1 ± 3.0	1.6

Whole Body	11 ± 1.1		5.8 ± 0.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC002911-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC002911	1.8 ± 0.1	1.2 ± 0.1	0.7 ± 0.1	1.5 ± 0.7

TC002911-RA	1.8 ± 0.1	1.2 ± 0.1	0.7 ± 0.1	1.5 ± 0.7