BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC002918

Symbol
hoip

Product
NHP2-like protein 1 homolog

NCBI Equivalent
664143

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	17 ± 1.6	0.5	71 ± 26	1.8
Brain	21 ± 1.6	0.7	37 ± 8.2	0.9
Anterior Midgut	353 ± 27	12	135 ± 15	3.4
Posterior Midgut	385 ± 52	13	101 ± 9.7	2.6
Hindgut	48 ± 15	1.6	31 ± 7.6	0.8
Tubules (Free)	32 ± 1.7	1.1	23 ± 3.3	0.6
Perirectal Tubules	28 ± 5.4	0.9
Rectum	28 ± 1.0	0.9
Rectal complex	24 ± 6.0	0.8	36 ± 4.3	0.9
Fat Body	61 ± 8.5	2.0	82 ± 42	2.1
Male Gonads	75 ± 22	2.5
Female Gonads	151 ± 15	5.0
Carcass	59 ± 12	1.9	82 ± 35	2.1

Whole Body	30 ± 3.5		39 ± 9.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC002918-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC002918	260 ± 22	1230 ± 324	1289 ± 450	523 ± 90

TC002918-RA	260 ± 22	1230 ± 324	1289 ± 450	523 ± 90