BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC002940

Symbol
Gar1

Product
Probable H/ACA ribonucleoprotein complex subunit 1-like Protein

iBeetle-Base
TC002940

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
No paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	2.6 ± 0.4	0.6	8.9 ± 2.8	2.3
Brain	0.7 ± 0.1	0.2	1.0 ± 0.2	0.3
Anterior Midgut	4.6 ± 0.8	1.1	2.5 ± 0.8	0.6
Posterior Midgut	5.7 ± 0.3	1.3	1.7 ± 0.2	0.4
Hindgut	0.8 ± 0.2	0.2	0.6 ± 0.3	0.2
Tubule	3.0 ± 0.4	0.7	3.2 ± 1.0	0.8
Rectal complex	3.6 ± 0.5	0.8	3.4 ± 0.8	0.9
Fat Body	0.9 ± 0.6	0.2	1.7 ± 0.2	0.4
Male Gonads	1.2 ± 0.3	0.3
Female Gonads	1.5 ± 0.3	0.3
Carcass	0.9 ± 0.3	0.2	0.9 ± 0.6	0.2

WholeBody	4.2 ± 0.8		3.9 ± 0.7

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult											Larval
	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC002940-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC002940	5.4 ± 0.8	12 ± 3.0	9.9 ± 1.0	4.2 ± 2.0

TC002940-RA	5.4 ± 0.8	12 ± 3.0	9.9 ± 1.0	4.2 ± 2.0