BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC003024

Symbol
LOC100142032

Product
Contactin-3-like Protein

iBeetle-Base
TC003024

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
No paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	7.9 ± 0.4	2.2	1.7 ± 0.5	0.5
Brain	5.1 ± 2.3	1.5	6.3 ± 0.7	1.8
Anterior Midgut	0.7 ± 0.3	0.2	1.0 ± 0.2	0.3
Posterior Midgut	0.4 ± 0.1	0.1	1.3 ± 0.2	0.4
Hindgut	1.2 ± 0.5	0.3	1.5 ± 0.4	0.4
Tubule	1.8 ± 0.2	0.5	2.1 ± 0.2	0.6
Rectal complex	1.0 ± 0.1	0.3	0.9 ± 0.3	0.3
Fat Body	3.5 ± 0.7	1.0	1.3 ± 0.2	0.4
Male Gonads	1.6 ± 0.1	0.5
Female Gonads	2.5 ± 0.2	0.7
Carcass	1.4 ± 0.7	0.4	2.1 ± 1.1	0.6

WholeBody	3.5 ± 0.7		3.5 ± 2.9

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult											Larval
	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC003024-RA
TC003024-RB
TC003024-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC003024	4.8 ± 0.2	1.4 ± 0.1	0.7 ± 0.1	1.0 ± 0.3

TC003024-RA	0.6 ± 0.3	0.3 ± 0.3	0.2 ± 0.1	0.5 ± 0.4
TC003024-RB	1.6 ± 0.3	0.3 ± 0.2	0.4 ± 0.0	0.2 ± 0.1
TC003024-RC	2.5 ± 0.1	0.8 ± 0.2	0.1 ± 0.1	0.3 ± 0.0