BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC003078

Symbol
LOC655589

Product
Probable RNA-binding protein 19-like Protein

iBeetle-Base
TC003078

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.8 ± 0.2	0.3	4.7 ± 0.7	1.4
Brain	2.4 ± 0.2	0.2	2.9 ± 0.1	0.9
Anterior Midgut	3.2 ± 0.1	0.3	2.3 ± 0.6	0.7
Posterior Midgut	3.1 ± 0.1	0.3	3.1 ± 0.7	0.9
Hindgut	3.3 ± 1.0	0.3	3.0 ± 0.4	0.9
Tubule	5.2 ± 0.7	0.5	4.2 ± 0.2	1.2
Perirectal Tubules	3.9 ± 0.4	0.3
Rectal complex	4.8 ± 0.1	0.4	3.9 ± 0.4	1.2
Rectum	3.8 ± 0.2	0.3
Fat Body	47 ± 24	4.1	3.4 ± 0.1	1.0
Male Gonads	124 ± 11	11
Female Gonads	3.0 ± 0.3	0.3
Carcass	3.4 ± 1.6	0.3	3.2 ± 0.3	1.0

Whole Body	12 ± 1.7		3.3 ± 0.6

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC003078-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC003078	12 ± 1.3	12 ± 0.2	11 ± 1.1	6.7 ± 0.3

TC003078-RA	12 ± 1.3	12 ± 0.2	11 ± 1.1	6.7 ± 0.3