BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC003140

Symbol
Coq9

Product
Ubiquinone biosynthesis protein COQ9, mitochondrial-like Protein

NCBI Equivalent
656667

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	7.4 ± 0.6	0.8	13 ± 1.8	1.1
Brain	5.6 ± 0.4	0.6	5.3 ± 0.2	0.5
Anterior Midgut	54 ± 3.4	5.7	19 ± 2.0	1.6
Posterior Midgut	39 ± 6.1	4.2	14 ± 0.9	1.2
Hindgut	14 ± 2.7	1.4	9.7 ± 1.6	0.9
Tubules (Free)	15 ± 0.3	1.6	17 ± 3.2	1.5
Perirectal Tubules	15 ± 3.1	1.6
Rectum	10 ± 0.8	1.1
Rectal complex	13 ± 1.5	1.4	12 ± 1.1	1.1
Fat Body	9.0 ± 1.1	1.0	21 ± 3.2	1.8
Male Gonads	8.1 ± 0.1	0.9
Female Gonads	12 ± 1.0	1.3
Carcass	11 ± 1.4	1.2	11 ± 1.4	1.0

Whole Body	9.5 ± 0.9		11 ± 4.0

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC003140-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC003140	28 ± 2.3	13 ± 0.4	13 ± 0.4	12 ± 1.6

TC003140-RA	28 ± 2.3	13 ± 0.4	13 ± 0.4	12 ± 1.6