BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC003214

Symbol
sun

Product
stunted

NCBI Equivalent
658713

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	188 ± 4.0	1.3	272 ± 13	0.9
Brain	138 ± 8.5	0.9	208 ± 25	0.7
Anterior Midgut	1251 ± 113	8.5	568 ± 73	1.8
Posterior Midgut	1074 ± 187	7.3	365 ± 22	1.2
Hindgut	585 ± 62	4.0	414 ± 123	1.3
Tubules (Free)	249 ± 26	1.7	225 ± 30	0.7
Perirectal Tubules	226 ± 80	1.5
Rectum	80 ± 7.7	0.5
Rectal complex	270 ± 3.8	1.8	312 ± 35	1.0
Fat Body	256 ± 47	1.7	2188 ± 446	6.9
Male Gonads	165 ± 41	1.1
Female Gonads	104 ± 15	0.7
Carcass	1166 ± 241	7.9	2746 ± 1121	8.7

Whole Body	147 ± 18		316 ± 219

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC003214-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC003214	253 ± 22	492 ± 18	675 ± 170	506 ± 62

TC003214-RA	253 ± 22	492 ± 18	675 ± 170	506 ± 62