BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC003316

Symbol
Ccz1

Product
Vacuolar fusion protein CCZ1 homolog-like Protein

NCBI Equivalent
655666

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	7.6 ± 0.6	1.0	3.8 ± 1.1	0.8
Brain	9.2 ± 1.6	1.2	7.6 ± 0.3	1.6
Anterior Midgut	5.1 ± 0.2	0.7	5.0 ± 1.2	1.0
Posterior Midgut	4.9 ± 0.4	0.6	6.5 ± 0.6	1.4
Hindgut	7.7 ± 1.2	1.0	6.1 ± 0.4	1.3
Tubules (Free)	7.0 ± 0.3	0.9	6.0 ± 0.1	1.3
Perirectal Tubules	12 ± 3.0	1.6
Rectum	9.4 ± 0.4	1.2
Rectal complex	7.3 ± 0.5	0.9	4.9 ± 0.3	1.0
Fat Body	7.8 ± 0.8	1.0	7.3 ± 2.1	1.5
Male Gonads	11 ± 0.2	1.5
Female Gonads	5.6 ± 0.7	0.7
Carcass	6.0 ± 0.4	0.8	5.8 ± 0.8	1.2

Whole Body	7.7 ± 0.3		4.8 ± 0.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC003316-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC003316	6.5 ± 0.6	4.4 ± 0.6	4.8 ± 0.7	6.5 ± 1.1

TC003316-RA	6.5 ± 0.6	4.4 ± 0.6	4.8 ± 0.7	6.5 ± 1.1