BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC003325

Symbol
Tmep

Product
Transmembrane protein 184B-like Protein

NCBI Equivalent
657171

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	26 ± 1.1	1.1	37 ± 12	1.4
Brain	72 ± 9.3	2.9	37 ± 1.5	1.4
Anterior Midgut	109 ± 16	4.4	159 ± 14	6.0
Posterior Midgut	115 ± 17	4.7	159 ± 34	6.0
Hindgut	63 ± 26	2.6	58 ± 20	2.2
Tubules (Free)	42 ± 7.6	1.7	40 ± 1.1	1.5
Perirectal Tubules	26 ± 1.7	1.1
Rectum	31 ± 1.6	1.3
Rectal complex	18 ± 1.6	0.7	25 ± 3.1	1.0
Fat Body	29 ± 6.5	1.2	13 ± 6.7	0.5
Male Gonads	70 ± 4.8	2.9
Female Gonads	78 ± 17	3.2
Carcass	27 ± 4.1	1.1	101 ± 62	3.8

Whole Body	25 ± 1.2		26 ± 5.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC003325-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC003325	11 ± 0.5	12 ± 1.4	9.5 ± 1.1	8.2 ± 0.6

TC003325-RA	11 ± 0.5	12 ± 1.4	9.5 ± 1.1	8.2 ± 0.6