BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC003351
Symbol
 scu
Product
 3-hydroxyacyl-CoA dehydrogenase type-2-like Protein
NCBI Equivalent
660648
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head29 ± 1.81.124 ± 4.40.6
Brain12 ± 1.60.512 ± 0.70.3
Anterior Midgut122 ± 4.74.770 ± 111.9
Posterior Midgut132 ± 165.173 ± 172.0
Hindgut20 ± 5.80.814 ± 1.20.4
Tubules (Free)45 ± 0.21.741 ± 4.81.1
Perirectal Tubules10 ± 1.80.4  
Rectum9.8 ± 0.90.4  
Rectal complex14 ± 1.40.519 ± 3.00.5
Fat Body133 ± 515.2284 ± 257.7
Male Gonads10 ± 1.90.4  
Female Gonads23 ± 2.50.9  
Carcass150 ± 375.829 ± 130.8
Whole Body26 ± 1.637 ± 12
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC003351-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC00335122 ± 1.526 ± 2.439 ± 5.032 ± 3.2
TC003351-RA22 ± 1.526 ± 2.439 ± 5.032 ± 3.2
0–1 h1–24 h24–36 h36–72 h01020304050FPKM