BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC003371

Product
Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog-like Protein

iBeetle-Base
TC003371

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
No paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	46 ± 2.8	1.1	16 ± 5.2	0.3
Brain	1.3 ± 0.1	0.0	3.9 ± 1.1	0.1
Anterior Midgut	648 ± 57	15	464 ± 196	9.1
Posterior Midgut	878 ± 88	20	601 ± 124	12
Hindgut	14 ± 4.4	0.3	11 ± 2.5	0.2
Tubule	152 ± 45	3.5	149 ± 8.4	2.9
Perirectal Tubules	27 ± 4.5	0.6
Rectal complex	30 ± 4.1	0.7	28 ± 3.8	0.5
Rectum	17 ± 9.2	0.4
Fat Body	22 ± 9.0	0.5	27 ± 9.4	0.5
Male Gonads	54 ± 11	1.3
Female Gonads	6.8 ± 5.5	0.2
Carcass	417 ± 311	9.7	14 ± 6.9	0.3

Whole Body	43 ± 5.1		51 ± 6.9

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC003371-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC003371	4.8 ± 0.6	33 ± 1.0	9.7 ± 0.3	13 ± 3.0

TC003371-RA	4.8 ± 0.6	33 ± 1.0	9.7 ± 0.3	13 ± 3.0