BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC003373

Symbol
pnut

Product
Protein peanut-like Protein

NCBI Equivalent
656651

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	13 ± 2.7	0.5	24 ± 1.9	1.4
Brain	40 ± 0.7	1.6	74 ± 7.8	4.3
Anterior Midgut	76 ± 10	3.0	77 ± 5.2	4.5
Posterior Midgut	85 ± 3.8	3.3	80 ± 5.5	4.6
Hindgut	10 ± 6.0	0.4	14 ± 1.0	0.8
Tubules (Free)	8.1 ± 1.8	0.3	16 ± 1.7	0.9
Perirectal Tubules	20 ± 2.2	0.8
Rectum	21 ± 1.5	0.8
Rectal complex	15 ± 1.0	0.6	20 ± 2.0	1.2
Fat Body	49 ± 6.2	1.9	39 ± 33	2.3
Male Gonads	74 ± 23	2.9
Female Gonads	25 ± 4.5	1.0
Carcass	18 ± 2.5	0.7	15 ± 2.3	0.9

Whole Body	26 ± 1.3		17 ± 1.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC003373-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC003373	16 ± 4.4	21 ± 6.5	31 ± 7.6	30 ± 4.8

TC003373-RA	16 ± 4.4	21 ± 6.5	31 ± 7.6	30 ± 4.8