BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC003402

Symbol
LOC655590

Product
Multidrug resistance protein homolog 65-like Protein

NCBI Equivalent
655590

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	28 ± 1.6	5.3	8.1 ± 5.5	0.9
Brain	14 ± 1.0	2.7	46 ± 15	5.2
Anterior Midgut	0.8 ± 0.2	0.1	1.2 ± 0.3	0.1
Posterior Midgut	1.0 ± 0.2	0.2	3.8 ± 0.8	0.4
Hindgut	5.2 ± 4.1	1.0	2.1 ± 0.5	0.2
Tubules (Free)	55 ± 5.1	10	46 ± 4.6	5.2
Perirectal Tubules	4.2 ± 1.3	0.8
Rectum	1.9 ± 0.2	0.4
Rectal complex	5.5 ± 0.6	1.1	4.4 ± 0.6	0.5
Fat Body	0.3 ± 0.1	0.1	1.2 ± 0.3	0.1
Male Gonads	0.3 ± 0.1	0.1
Female Gonads	0.3 ± 0.1	0.1
Carcass	4.5 ± 1.3	0.9	5.5 ± 1.0	0.6

Whole Body	5.2 ± 0.1		8.9 ± 3.8

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC003402-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC003402	0.5 ± 0.1	0.2 ± 0.1	0.1 ± 0.0	0.1 ± 0.0

TC003402-RA	0.5 ± 0.1	0.2 ± 0.1	0.1 ± 0.0	0.1 ± 0.0