BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC003404
Symbol
 hfw
Product
 Protein halfway-like Protein
NCBI Equivalent
656168
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head11 ± 0.91.94.5 ± 1.90.6
Brain2.4 ± 0.40.41.9 ± 0.20.3
Anterior Midgut1.7 ± 0.40.32.4 ± 0.40.3
Posterior Midgut1.5 ± 0.30.33.3 ± 0.50.5
Hindgut3.6 ± 1.00.63.6 ± 1.20.5
Tubules (Free)10 ± 0.71.89.8 ± 0.81.4
Perirectal Tubules11 ± 2.81.9  
Rectum11 ± 1.91.9  
Rectal complex5.5 ± 0.80.93.2 ± 0.50.5
Fat Body8.2 ± 2.21.415 ± 2.62.2
Male Gonads1.5 ± 0.40.3  
Female Gonads2.4 ± 0.10.4  
Carcass9.6 ± 2.11.611 ± 0.61.6
Whole Body5.9 ± 0.57.0 ± 3.9
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC003404-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0034041.0 ± 0.10.7 ± 0.10.8 ± 0.20.6 ± 0.1
TC003404-RA1.0 ± 0.10.7 ± 0.10.8 ± 0.20.6 ± 0.1
0–1 h1–24 h24–36 h36–72 h0246810FPKM