BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC003711

Symbol
ArgRS-m

Product
Probable arginine--tRNA ligase, cytoplasmic-like Protein

NCBI Equivalent
654913

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	2.6 ± 0.2	0.1	3.2 ± 0.8	1.1
Brain	1.9 ± 0.1	0.1	2.7 ± 0.3	0.9
Anterior Midgut	5.6 ± 0.3	0.2	3.6 ± 0.7	1.2
Posterior Midgut	4.2 ± 0.4	0.1	3.1 ± 0.2	1.1
Hindgut	3.9 ± 0.4	0.1	3.6 ± 0.2	1.2
Tubules (Free)	3.9 ± 0.8	0.1	4.0 ± 0.5	1.4
Perirectal Tubules	4.9 ± 1.3	0.1
Rectum	3.5 ± 0.2	0.1
Rectal complex	4.2 ± 0.2	0.1	3.8 ± 0.6	1.3
Fat Body	31 ± 14	0.9	4.3 ± 1.1	1.5
Male Gonads	93 ± 11	2.7
Female Gonads	7.1 ± 0.3	0.2
Carcass	4.1 ± 1.4	0.1	3.9 ± 0.2	1.3

Whole Body	34 ± 6.9		2.9 ± 0.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC003711-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC003711	11 ± 0.6	8.7 ± 0.9	5.2 ± 0.5	4.5 ± 0.5

TC003711-RA	11 ± 0.6	8.7 ± 0.9	5.2 ± 0.5	4.5 ± 0.5