BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC003848
Symbol
 LOC656503
Product
 CDK5RAP3-like protein
NCBI Equivalent
656503
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head14 ± 0.70.726 ± 7.61.3
Brain12 ± 0.60.611 ± 0.60.6
Anterior Midgut20 ± 0.51.025 ± 1.81.2
Posterior Midgut23 ± 1.51.235 ± 3.61.7
Hindgut19 ± 4.50.918 ± 1.10.9
Tubules (Free)29 ± 1.41.522 ± 0.91.1
Perirectal Tubules24 ± 2.51.2  
Rectum20 ± 0.61.0  
Rectal complex23 ± 0.31.220 ± 1.01.0
Fat Body17 ± 4.70.824 ± 2.01.2
Male Gonads42 ± 4.52.1  
Female Gonads10 ± 0.60.5  
Carcass14 ± 1.50.716 ± 2.60.8
Whole Body20 ± 2.420 ± 2.3
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC003848-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0038488.8 ± 1.410 ± 0.611 ± 0.98.8 ± 0.4
TC003848-RA8.8 ± 1.410 ± 0.611 ± 0.98.8 ± 0.4
0–1 h1–24 h24–36 h36–72 h05101520FPKM