BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC003968
NCBI Equivalent
 not available
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head11 ± 0.20.84.7 ± 1.91.5
Brain66 ± 0.84.530 ± 3.49.4
Anterior Midgut6.0 ± 1.90.41.5 ± 0.40.5
Posterior Midgut1.5 ± 0.30.10.4 ± 0.20.1
Hindgut16 ± 0.51.19.7 ± 3.23.0
Tubules (Free)17 ± 3.51.14.7 ± 1.41.4
Perirectal Tubules3.1 ± 0.50.2  
Rectum5.2 ± 1.00.4  
Rectal complex4.2 ± 0.70.32.2 ± 0.20.7
Fat Body10.0 ± 1.20.72.2 ± 0.90.7
Male Gonads50 ± 113.4  
Female Gonads1.3 ± 0.50.1  
Carcass3.9 ± 0.40.34.2 ± 0.91.3
Whole Body15 ± 3.13.2 ± 0.3
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC003968-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0039681.6 ± 0.10.8 ± 0.10.2 ± 0.12.1 ± 0.5
TC003968-RA1.6 ± 0.10.8 ± 0.10.2 ± 0.12.1 ± 0.5
0–1 h1–24 h24–36 h36–72 h0246810FPKM